BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A03SP1|AL425309
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1299 1611 0.0
>3x_Contig1299
Length = 7525
Score = 1611 bits (810), Expect = 0.0
Identities = 823/829 (99%), Gaps = 1/829 (0%)
Strand = Plus / Minus
Query: 1 ccgawaatattgaacagtcaattaccgaacagcaggattggagagtgttggaattagcta 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6456 ccgataatattgaacagtcaattaccgaacagcaggattggagagtgttggaattagcta 6397
Query: 61 tttaccagcttcacaatttcgccgaatccataagaaataaccttttcggagtcaataaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6396 tttaccagcttcacaatttcgccgaatccataagaaataaccttttcggagtcaataaga 6337
Query: 121 cagaaatatccacctcgaaacctgctcaattaatggaaaagtatatgacaacattgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6336 cagaaatatccacctcgaaacctgctcaattaatggaaaagtatatgacaacattgttga 6277
Query: 181 atcatccaacgttattccagatgaacaacccattagttcagatctcattctttgaacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6276 atcatccaacgttattccagatgaacaacccattagttcagatctcattctttgaacttg 6217
Query: 241 ttgtaagacataataacttcattcaagtagaaaacaaagacttaactttgcttaatatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6216 ttgtaagacataataacttcattcaagtagaaaacaaagacttaactttgcttaatatct 6157
Query: 301 tttgtactcctttcagtatgttcagtggtaacgaacgtgtcaggttgagaacatggtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6156 tttgtactcctttcagtatgttcagtggtaacgaacgtgtcaggttgagaacatggtatt 6097
Query: 361 tatttacaaggttgatcaaaacctcaaagccaaaattatccaccgattttttgtcaatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6096 tatttacaaggttgatcaaaacctcaaagccaaaattatccaccgattttttgtcaatgc 6037
Query: 421 ttttgtccaaaatttctccacttctttccataaaggcaantcctttggcacaagaactgg 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6036 ttttgtccaaaatttctccacttctttccataaaggcaagtcctttggcacaagaactgg 5977
Query: 481 atactattttcgatagccaactgtaccttttcgagggaactggtgtactaattggagcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5976 atactattttcgatagccaactgtaccttttcgagggaactggtgtactaattggagcta 5917
Query: 541 acgttaacaatgagtatgaaattctagatggtgttttaacacctttattcgcggatytcg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5916 acgttaacaatgagtatgaaattctagatggtgttttaacacctttattcgcggatctcg 5857
Query: 601 aacaatgtatttcggctcaggtgaaaaacccacaagttgtattgcaaactcatcatattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5856 aacaatgtatttcggctcaggtgaaaaacccacaagttgtattgcaaactcatcatattt 5797
Query: 661 taatggctatcggtactgtggctcgtggtgtacatagcggactagttcctgataatcaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5796 taatggctatcggtactgtggctcgtggtgtacatagcggactagttcctgataatcaag 5737
Query: 721 tcaataatgccaaggtcagtkagagagttatttgttaagagcttgattgagaaattttcc 780
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 5736 tcaataatgccaaggtcagtgagagagttatttg-taagagcttgattgagaaattttcc 5678
Query: 781 aatattgccgaggtcatcttkgttacgttttcttattttaacaaatttg 829
|||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5677 aatattgccgaggtcatcttggttacgttttcttattttaacaaatttg 5629
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6398
Number of Sequences: 1807
Number of extensions: 6398
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)